diff --git a/docs/_layouts/default.html b/docs/_layouts/default.html
index bb606e15..60f87db8 100644
--- a/docs/_layouts/default.html
+++ b/docs/_layouts/default.html
@@ -12,7 +12,7 @@
       <a href="https://github.com/NuSkooler/enigma-bbs"><img style="position: absolute; top: 0; right: 0; border: 0;" src="https://camo.githubusercontent.com/e7bbb0521b397edbd5fe43e7f760759336b5e05f/68747470733a2f2f73332e616d617a6f6e6177732e636f6d2f6769746875622f726962626f6e732f666f726b6d655f72696768745f677265656e5f3030373230302e706e67" alt="Fork me on GitHub" data-canonical-src="https://s3.amazonaws.com/github/ribbons/forkme_right_green_007200.png"></a>
         <div class="sidebar" id="sidebar">
             <div class="container">
-                <a href="/"><img src="{{ '/assets/images/enigma-logo.png' | relative_url }}" class="logo" /></a>
+                <a href="{{ site.baseurl }}"><img src="{{ '/assets/images/enigma-logo.png' | relative_url }}" class="logo" /></a>
             </div>
             {% capture nav_include %}{% include nav.md %}{% endcapture %}
             {{ nav_include | markdownify }}
diff --git a/docs/configuration/directory-structure.md b/docs/configuration/directory-structure.md
index f27878c7..d968df17 100644
--- a/docs/configuration/directory-structure.md
+++ b/docs/configuration/directory-structure.md
@@ -6,15 +6,15 @@ All paths mentioned here are relative to the ENiGMA½ checkout directory.
 
 | Directory           | Description                                                                                               |
 |---------------------|-----------------------------------------------------------------------------------------------------------|
-| `/art/general`      | Non-theme art - welcome ANSI, logoff ANSI, etc. See [General Art](/art/general).
-| `/art/themes`       | Theme art. Themes should be in their own subdirectory and contain a theme.hjson. See [Themes](/art/themes).
-| `/config`           | config.hjson, [menu.hjson](/configuration/menu-hjson) and prompt.hjson storage. Also default path for SSL certs and public/private keys
+| `/art/general`      | Non-theme art - welcome ANSI, logoff ANSI, etc. See [General Art]({{ site.baseurl }}{% link art/general.md %}).
+| `/art/themes`       | Theme art. Themes should be in their own subdirectory and contain a theme.hjson. See [Themes]({{ site.baseurl }}{% link art/themes.md %}).
+| `/config`           | config.hjson, [menu.hjson]({{ site.baseurl }}{% link configuration/menu-hjson.md %}) and prompt.hjson storage. Also default path for SSL certs and public/private keys
 | `/db`               | All ENiGMA½ databases in Sqlite3 format
 | `/docs`             | These docs ;-)
-| `/dropfiles`        | Dropfiles created for [local doors](/modding/local-doors)
-| `/logs`             | Logs. See [Monitoring Logs](/troubleshooting/monitoring-logs)
+| `/dropfiles`        | Dropfiles created for [local doors]({{ site.baseurl }}{% link modding/local-doors.md %})
+| `/logs`             | Logs. See [Monitoring Logs]({{ site.baseurl }}{% link troubleshooting/monitoring-logs.md %})
 | `/misc`             | Stuff with no other home; reset password templates, common password lists, other random bits
-| `/mods`             | User mods. See [Modding](/modding/existing-mods)
+| `/mods`             | User mods. See [Modding]({{ site.baseurl }}{% link modding/existing-mods.md %})
 | `/node_modules`     | External libraries required by ENiGMA½, installed when you run `npm install`
 | `/util`             | Various tools used in running/debugging ENiGMA½
 | `/www`              | ENiGMA½'s built in webserver root directory
\ No newline at end of file